SNP Profiles matching GU 221 /H

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
1._GC-01-074-4-10	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
2._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
3._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
4._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
5._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
6._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
7._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
8._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
9._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
10._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
11._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
12._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
13._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
14._GC-03-026-2-15	CC	AG	CC	CC	TT	_	TT	GT	TT	CC	AT	GG	CC	AA
15._GC-03-026-2-15	CC	AG	CC	CC	TT	AA	TT	GT	TT	CC	AT	GG	CC	AA
16._RUQ_1495	_	AG	CC	CC	_	_	_	GT	_	_	_	_	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
1._GC-01-074-4-10	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
2._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
3._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
4._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
5._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
6._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
7._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
8._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
9._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
10._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
11._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
12._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
13._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
14._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
15._GC-03-026-2-15	CC	TT	CG	CT	TT	CC	GG	AA	TT	CC	GG	GG	CC	AC
16._RUQ_1495	_	_	_	_	TT	CC	GG	_	TT	CC	GG	GG	CC	AA

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
1._GC-01-074-4-10	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
2._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
3._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
4._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
5._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
6._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
7._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
8._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
9._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
10._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
11._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
12._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
13._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
14._GC-03-026-2-15	GG	GG	AA	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
15._GC-03-026-2-15	GG	GG	_	TT	GG	CG	CC	TT	GG	AC	AA	GG	X_X	X_X
16._RUQ_1495	GG	_	AA	CT	GG	CG	CC	TT	GG	AA	_	_	X_X	X_X

Input profile: GU_221_/H

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Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 4 > FP

Dapeng Zhang, 2016

1._GU_221_/H GC-01-074-4-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

Mars, 2018

2._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP3

Mars, 2018

3._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

4._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP4

Mars, 2018

5._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

6._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

7._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

8._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9 > FP1

Mars, 2018

9._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

Mars, 2018

10._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

Mars, 2018

11._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

Mars, 2018

12._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15

Mars, 2018

13._U_54_[PER] GC-03-026-2-15

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

Mars, 2018

14._U_54_[PER] GC-03-026-2-15

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

15._U_54_[PER] GC-03-026-2-15

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

Mars, 2018

16._U_45_[PER] RUQ_1495

93.8 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25

SNP Profiles matching GU 221 /H

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Input profile: GU_221_/H

1._GU_221_/H GC-01-074-4-10

identical 40 shared markers

2._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

3._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

4._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

5._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

6._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

7._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

8._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

9._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

10._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

11._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

12._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

13._U_54_[PER] GC-03-026-2-15

identical 40 shared markers

14._U_54_[PER] GC-03-026-2-15

identical 39 shared markers

15._U_54_[PER] GC-03-026-2-15

identical 39 shared markers

16._U_45_[PER] RUQ_1495

93.8 % 24 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
39 shared markers

identical
39 shared markers

93.8 %
24 shared markers